SYSTEMATIC BIOLOGY

THE CERCOZOAE

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PHYLUM GRANULORETICULOSA

INTRODUCTION TO THE GRANULORETICULOSA

Granuloreticulosa (GRAN-u-lo-re-tik-u-LO-sa) is formed from two Latin roots that mean little grain (granulum); and net-like (reticulum).  The reference is to organisms that have grain-like tests from which an anastomosing web of pseudopodia emerges.

The Granuloreticulosa or Foraminifera (window bearers, and informally called forams) generally are members of the marine plankton and benthos where they can be very abundant and diverse.  They capture their food by filtering the surrounding water with a reticulate, anastomosing pseudopodial web.   Although Gromia and Micrometes (Figures A and B, respectively) are testate filopodial amoebae, they are not recognized as members of this phylum by Lee et al. (2000), while Allogromia (Figure C) is so recognized.  Most of the remaining groups of forams make an internal test of calcium carbonate that may or may not be perforated by patterns of holes (the name "foraminifera" means "window-bearer"; Figures D-I).  Often, the tests are quite complex with multiple chambers that increase in size and somewhat reminiscent of a Nautilus shell.  They have a decided and complex alternation of generation and dimorphic nuclei like the ciliates.  

Consider the life history of a complex foram like MetarotaliellaThe gamont (1 in the attached life history) is haploid and associates with one or more other gamonts.  They hold themselves in place by secreting a copulation jelly and then the gamonts undergo multiple mitoses with cytokineses to form many gametes.  Compatible mating types fuse to form zygotes.  The diploid cells begin to undergo mitosis without cytokinesis forming multinucleate cells.  After they reach 4 nuclei, one enlarges and becomes polyploid to become the somatic nucleus (analogous to the macronucleus of a ciliate).  As the cell enlarges, more calcareous chambers are added until finally the somatic cells undergo meiosis and the somatic nucleus aborts and is reabsorbed.  The resulting 12 haploid nuclei accrete cytoplasm and become 1-chambered gamonts that begin to enlarge until copulation is triggered.  Only through this complex alternation of generation can they increase numbers of cells.  Many taxa (like Figures A-C) have only single chambers.

This type of cell and life history seems to have been quite successful.  They appeared in the fossil record during the Cambrian and persisted to the present.  However, their numbers and diversity allow forams to be among the most useful index fossils for marine strata.  For that reason also they are among the most useful index fossils to use in oil exploration.  

Nummulites is a very large (up to 6 cm in diameter) foram from the early Tertiary (Eocene).  It looked like Figure E, and its name in Latin means little coin.  They were so abundant in the shallow seas that covered part of Egypt, that their accumulated tests were major components of the thick beds of limestone from which the outer sheathing stones of the great pyramids were made.

Xenophylophorids are huge amoeboid cells that likely are benthic forams that have barium sulfate crystals in their spongy tests (Figure J). Some can be as large as 24 cm across (but very thin).  There is little unanimity on their relationships, and the xenophyloporids may have to move to another kingdom.

gromia-hosei.jpg (69099 bytes)

A. Gromia, an atestate filopodial cell.

micrometes30_dhw-mbl.jpg (24098 bytes)

B. Micrometes has a simple organic test that has a single chamber.

allogromia-unige.jpg (134696 bytes)

C. Allogromia has a proteinaceous test with a single chamber.

textularia-USGS.jpg (13058 bytes)

D. Textularia has a test made of two off-set series of chambers that are partly mineralized and covered with sand grains.

Spirillina-cf-berkeley.gif (115451 bytes)

E. Spirillina makes a planospiral test of calcite.

miliolareticulata_ekw-mbl.jpg (31966 bytes)

F. Miliola produces a test with a tight coil whose chambers are not separated by walls.

Lagena-apiopleura-berkeley.gif (86293 bytes)

G. Laegena has a test of a single chamber made of optically-radiate calcite crystals.  There is a single opening to the test.

Rotaliella-sp-ifremer.jpg (33344 bytes)

H. Rotaliella has a multi-chambered perforate test wall with internal canal system.

Globigerina-berkeley.jpg (36468 bytes)

I. Globigerina makes a wall of hyaline calcite with many regularly-arranged perforations.  This genus is found in almost all latitudes from the tropics to the subpolar seas.

Cerelpemma-protozoa-guide.jpg (134537 bytes)

J. Cerelpemma, a xenophyophorid produces a lumpy irregular test that is sponge-like in its form. From 4-6km deep in the Pacific Ocean.

Images taken from:
A:  http://protist.i.hosei.ac.jp/PDB/Images/Sarcodina/Gromia/sp_3.html
B: http://microscope.mbl.edu/baypaul/microscope/images/t_imgAZ/micrometes30_dhw.jpg   
C:  http://www.unige.ch/sciences/biologie/biani/msg/people/Fabien/Gromia2.htm 
D:  http://coastal.er.usgs.gov/biscayne-forams/gallery.html 
E: http://www.ucmp.berkeley.edu/people/klf/KLF_files/Spirillina-cf.-vivipara.gif 
F: http://microscope.mbl.edu/scripts/microscope.php?func=browseAlpha&letter=M&taxa=Miliola  
G: http://www.ucmp.berkeley.edu/people/klf/Current_Projects.htm  
H: http://www.ifremer.fr/crema/PGSauriau/foraminifera/taxonomy/rotaliina/Rotaliella.html   
I: http://www.ucmp.berkeley.edu/people/klf/MicroGalleryLarge_files/Globigerina.jpg  
J: Gooday and Tendal (2000)

SYNOPTIC DESCRIPTION OF THE GRANULORETICULOSA

The following description of the Phylum Granuloreticulosa was taken from Lee (1990), Lee et al. (2000). Margulis and Schwartz (1988 and 1998),  Kudo (1966), Grell (1976), Cushman (1980), Bovee (1985b), Bock et al. (1985) and Sleigh et al. (1984).

I. SYNONYMS: Forams, Foraminifera, Granuloreticulosa.

II. NUMBER: Likely as many as 35,000-40,000 species, but only 4,000 species described, many of which are extinct taxa.

III. PHYLUM CHARACTERISTICS:

A. Structure and Physiology:

Cell Form: Unicells with an anastomosing web or net-like pseudopodial array, called reticulopodia. Internal test perforated by many pores or foramina.

Flagella: Some produce flagellated isogametes with two unequal flagella; reports conflict, one may be tinsel or both may be whiplash.

Basal Bodies: Probably perpendicular but orientation has not been confirmed.

Cell Covering: Naked but with an internal skeleton (test) of calcium carbonate or organic material.

Chloroplasts: Some with endosymbiotic photosynthetic protists.

Food Reserves: Not known.

Mitochondria: Present with tubular cristae.

Golgi: Present.

Nucleus: Nuclear differentiation (generative and somatic nuclei) in some species with a diploid phase.

Centrioles: Not known.

Inclusions and Ejectile Organelles:  Food vaculoes.

B. Mitosis, Meiosis and Life History

Mitosis: Heterokaryosis (=closed); the nuclear envelope does not break down.

Meiosis: Occurs but details are not known.

Sexual Reproduction and Life History:  Alternation of uninucleate haploid and multinucleate diploid phases in most described species.

Life Histories of:
Iridia
Myxotheca 
Patellina
Rotaliella
Metarotaliella

C. Ecology: Plankton and benthos; mostly marine, some freshwater.

SYSTEMATICS OF THE GRANULORETICULOSA

As it is defined here, the taxonomy of the Granuloreticulosa is a modification of Lee (1990) and of Margulis and Schwartz (1988 and 1998) in which it is designated Pr-17 and PR-4, respectively.  Kudo (1966), Grell (1976), Cushman (1980), Bovee (1985b), Bock et al. (1985) and Sleigh et al. (1984) lump the forams together with the amoebae, the slime molds and the actinopods. Forams are clearly different from the other "amoeboid" groups. The reticulopods produced by the forams are neither pseudopods nor actinopods (Margulis and Schwartz 1988 and 1998). Patterson (1989) suggests a connection with the chrysophyte complex based on the flagella produced by their motile cells (a view that he later -1999- repented of). Patterson (1999)  gives the web-branching pseudopodial system as a possible synapomorphy for the group.  The Xylophylophorids have been taxonomic nomads for  a long time, but from the time of their discovery they have been referred to as benthic forams (Tendal 1972; Patterson 1999).  Thus, I have kept the xenophyophorids together with the forams, but in their own class despite the misgivings of Lee et al. (2000).

Longet et al. (2003), Archibald et al. (2003), Archibald and Keeling (2004), and Nikolaev et al. (2004) show clear relationships between the foraminifera and taxa that are in the emerging supergroup called Cercozoa (or Rhizaria after Cavalier-Smith 2002).  Baldauf (2003) and Keeling (2004) produced a synthesis of molecular and structural analyses that suggested the eukaryotes occupy eight (or five) major clades.  Because of the diversity of form, complexity of life history and the occurrence of dimorphic nuclei, all of which argue for raising the Granureticulosa to phylum-level rank, I present the following system.

HIERARCHICAL CLASSIFICATION OF THE GRANULORETICULOSA

The following system is a modification of Lee (1990) and Lee et al. (2000) as it is informed by Patterson (1999) and the analysis of Nikolaev et al. (2004).

CLASS ATHALAMEA

Cells without a test but with an anastomosing web of cytoplasm; cells have no alternation of generation and are multinucleate; freshwater. 

ORDER BIOMYXIDA (ATHALAMIA).

Gromia, Reticulomyxa, Biomyxa, Gymnophrys, Rhizoplasma.

CLASS MONOTHALAMEA

Cells with a single-chambered organic test which is not internal; one opening in the test from which the cytoplasmic web emerges; no alternation of generations. Lee (1990) argues that the Monothalaminologia should not be separated from the Polythalaminologia. 

ORDER MICROMETIDA (MONOTHALAMIA).

Micrometes, Apogromia, Heterogromia.

CLASS POLYTHALAMEA (FORAMINIFERA)

Cells with a multichambered test, chambers often spirally arranged, most filopodia extending from the terminal aperture of the largest chamber; the test is variable and ranges from organic to an agglutination of particles to calcareous, hyaline or opaque; exclusively marine in a variety of habitats; often with symbiotic algae; some exhibit nuclear dimorphism; some have an alternation of sexual (gamont) and asexual (agamont) generations. This group is called the "forams" and has an extensive fossil record; this class has 4 orders.

ORDER ALLOGROMIDA

Cells which have a single chamber; the tests are flexible, smooth and membranous, often with agglutinated material.

Allogromia, Myxotheca, Ophiotuba, Boderia, Lagynia, Periptygma, Gloiogullmia, Cylindrogullmia.

ORDER ASTRORHIZIDA

Test with single chamber; shape variable (globular, tubular, or branching); may have proloculus with other irregular chambers; wall made of agglutinated material.

Vanhoeffenella, Pelosina, Astrorhiza, Astrorhizoidese, Schizammina, Jullienella, Astrammina, Pilulina, Saccamina, Ovammina, Technitella, Crithionina, Ammopemphix, Hemisphaerammina, Iridia, Lana, Ipoa, Normanina, Komokia, Septuma, Chrondrodapsis, Baculella, Edgertonia.

ORDER TEXTULARIDA

The tests are multichambered and covered by a layer of sand grains and other particles in an organic and partly mineral matrix.

Textularia, Clavulina, Trochammina, Ammodiscus, Psammosphaera, Schizammina, Rheophax, Miliammina, Adercotryma, Cystammina, Recurvoides, Cribrostomoides, Lituotuba, Ammobaculites, Ammoastula, Placopsilina, Cyclammina, Spirotextularia, Spiroplectammina, Vulvulina, Trochaminella, Portatrochammina, Tritaxis, Trochammina, Deuterammina, Jadammina, Arenoparrella, Remaneica, Asteroparatrochammina, Gaudryina, Globotextularia, Karreriella, Eggerella, Edgerelloides, Siphotextularia, Planctostoma, Clavulina, Valvulina.

ORDER ROBERTINIDA

Test multichambered; rolled trochospirally with internal walls; hyaline (made of aragonite) with fine pores.  Mainly extinct forms

Pseudobulimina, Cushmanella, Alliatina, Robertina, Robertinoides, Hoeglundina.

ORDER CARTERINIDA

Test of secreted calcite spicules.

Carterina, Zaninettia.

ORDER SPIRILLINIDA

Test calcitic; made of a single crystal (or a few).  Wall made by accretion of calcite rather than mineralization of organic matrix.

Nubecularia, Spirillina, Sejunctella, Mychostomina, Turrispirulina, Patellina, Patellinoides.

ORDER MILIOLIDA

The tests are multichambered and made of small calcite crystals which produces a porcelain appearance in the light.

Cornuspira, Meandrospira, Cornuspiroides, Cornuspirella, Fischerina, Trisegmentina, Subfischeri, Planispirina, Planispirinella, Wiesnerella, Nodobaculariella, Vertebralina, Fischerinella, Zoyaella, Glomulina, Nubeculina, Nodophthalmidium, Nubeculinita, Webbina, Nubecularia, Gymnesia, Nubeculopsis, Calcituba, Cornuspiramia, Riveroina, Pseudohauerina, Pseudohaurinella, Edentostomina, Ophthalamia, Spirophthalmidium, Cornuloculina, Rectospiroloculina, Adelosina, Cibrolinoides, Planispirinoides, Inaequalina, Pippinia, Nummulopyrgo, Flintia, Cribrospiroloculina, Neospiroloculina, Spiroloculina, Siphonaptera, Dentostomina, Schlumbergerina, Sigmoilopsis, Agglutinella, Ammomassilina, Pseudoflintina, Tubinella, Vertebrasigmoilina, Parrina, Articulina, Rectomassilina, Cibropyrgo, Nevillina, Pseudopyrgo, Mesosigmoilina, Biloculinella, Sigmoinella, Nummoloculina, Sigmoilina, Pyrgoella, Pyrgo, Sigmopyrgo, Anchihauerina, Sigmoilinella, Sigmoilinita, Massilinoides, Proemassilina, Massilina, Sigmoihauerina, Polysegmentina, Hauerina, Parahauerina, Parahauerinoides, Sissonia, Lorettaoides, Pseudomassilina, Miliolinella, Wellmanellinella, Steigerina, Ptychomiliola, Mesopateoris, Neopateoris, Involvohauerina, Flintinoides, Flintina, Subedentostomina, Pseudoschlumbergerina, Sigmella, Lachlanella, Cycloforina, Quinqueloculina, Pseudotriloculina, Varidentella, Cribromiliolinella, Cruciloculina, Triloculinella, Triloculinellus, Triloculinoides, Affinetrina, Triloculina, Borelis, Flosculinella, Alveolinella, Dendritina, Monalysidium, Spirolina, Coscinospira, Laevipeneroplis, Peneroplis,  Androsina, Archaias, Parasorites, Cycloputeolina, Cyclorbiculina, Marginopora, Sorites, Amphisorus, Cyclogyra, Squamulina, Ammobaculites, Miliammina, Nodosinum. Miliola.

ORDER LAGENIDA

Test made of radiate calcite crystals.

Sipholagena, Cribrolagena, Lagena, Procerolagena, Hyalinonetrion, Oolina, Fissurina, Parafissurina, Pristinosceptrella, Cushmanina, Solenina, Wiesnerina, Palliolatella, Phlegeria, Glandulina, Laryngosigma, Entolingulina, Seabrookia, Lingulina, Frondicularia, Dentalina, Nodosaria, Pyramidulina, Amphimorphina, Proxifrons, Lenticulina, Saracenaria, Vaginulina, Astacolus, Amphicoryna, Webbinella, Fussuripolymorphina, Polymorphina, Pyrulina, Globulina, Guttulina, Ramulina, Discoramulina.

ORDER ROTALIIDA

These cells have a hyaline, almost glassy test which has many foramina; the walls are laminar.

Stilostomella, Siphonodosaria, Nodogenerina, Bolivina, Bolivinellina, Brizalina, Abditodentrix, Bolivinita, Coryphostoma, Fursenkoina, Rutherfordoides, Sigmavirgulina, Stuartia, Ellipsobulimina, Ellipsoglandulina, Nodosarella, Pleurostomella, Islandiella, Globocassidulina, Cassidulina, Favocassidulina, Bursoelina, Ehrenbergina, Virgulinopsis, Birgulopsis, Cassidelina, Stainforthia, Bulimina, Globobulimina, Praeglobobulimina, Uvigerina, Euuvigerina, Siphouvigerina, Neouvigerina, Angulogerina, Trifarina, Hopkinsinella, Sagrinella, Rectobolivina, Loxostomina, Parabrizalina, Sagrina, Sagrinopsis, Siphogenerina, Acostina, Fijiella, Reussella, Chrysalidinella, Compressigerina, Valvobifarina, Siphoninoides, Siphonina, Siphoninella, Rotaliella, Metarotaliella, Rossyatella, Angulodiscorbis, Planoglabratella, Glabratellina, Glabratella, Rosalina, Neoconorbina, Planodiscorbis, Gavelinopsis, Baggina, Cancris, Valvulineria, Stetsonia, Epistominella, Pseudoparrella, Torresina, Laticarinina, Discobinita, Discorbinella, Cibicides, Paracibicides, Montfortella, Dyocibicides, Cyclocibicides, Carpenteria, Biarritzina, Rupertina, Sphaerogypsina, Acervulina, Planogypsina, Gypsina, Discogypsina, Sporadotrema, Homotrema, Miniacina, Eponidella, Palmerinella, Nuttalides, Pseudoeponides, Rubratella, Eoponidella, Asterigerinata, Astrononion, Nonionoides, Nonionella, Haynesina, Nonion, Melonis, Pullenia, Anomalinella, Chilostomella, Quadrimorphina, Alabamina, Svratkina, Osangularia, Oridorsalis, Anomilinoides, Gemellides, Heterolepa, Discomalina, Gyroidella, Gyroidina, Gyroidinopsis, Hansenisca, Hanzawaia, Nebobuccella, Buccella, Trichohyalus, Discorbis, Eponides, Ozawaia, Notorotalia, Parrellina, Elphidiella, Cibroelphidium, Elphidium, Schlumbergerella, Neorotalia, Calcarina, Baculogypsina, Ammonia, Pararotalia, Challengerella, Rotalidium, Asterorotalia, Pseudorotalia, Discorbis, Strebloides, Rotorbis, Rotorboides, Poroeponides, Neoeponides, Eponides, Heterostegina, Nummulites, Assilina, Operculina, Cycloclypeus, Heterocyclina, Calcarina, Elphidium, Hastigerina,Heterostegina, Globigerinella, Eponides, Cibicides, Planorbulina, , Cymbalopora, Homotrema, Annulopatellina, Patellina, Metarotiella, Rubratella, Glabratella, Loxostomum, Marginula,  Buliminella, Discorbis, 

ORDER GLOBIGERINIDA

Test perforate, hyline calcite.

Tenuitellinata, Globigerinita, Tinophodella, Tenuitella, Tenuitellita, Hastigerinopsis, Hastigerina, Orcadia, Sphaeroidinella, Globigerinoides, Globigerinella, Bolliella, Globigerina, Beella, Pulleniatina, Orbulina, Paragloborotalia, Clavatorella, Paragloborotalia, Neogloboquadrina, Berggenia, Turborotalita.

CLASS XENOPHYOPHOREA

Very large amoebae (usually larger than 1 cm).  Multinucleated with a test of cemented materials.  They accumulate waste (stercomata) between the cell and test.  Cytoplasm with barite crystals.

ORDER PSAMMINIDA

Generally well organized cells with well developed tests.  No linnellae (extracellular proteinaceous strips).

Aschemonella, Cerelasma, Cerelpemma, Galatheammina, Maudammina, Ocultammina, Psammetta, Psammina, Reticulammina, Semipsammina, Syringammina. Homogammina

ORDER STANNOMIDA

Tests with linnellae, extracellular proteinaceous strips.

Stannoma, Stannophyllum.


This page is maintained by Jack R. Holt.  Last revised: 03/14/2008.